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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43782553_43783196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43782553 - 43783196

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTATGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TATTTGTTATTT

Flanking Amino Acid:

LDDMPVKPYLGDGEGGIEDE

Intron Amino Acid Position:

1154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.7

40.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

77.9

0.63

0.9

74.4

40.5

Minor 5ss

32.4

-2

2.9

32.3

Minor BPS

51.5

0.13

2.2

76.26

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583