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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43784172_43785125_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43784172 - 43785125

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGCAGT

5'SS Class:

major

3'SS Sequence:

TTTTCAATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

ARGQVVCNVKHLHRVLVAEV

Intron Amino Acid Position:

1232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

70.5

41.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.5

0.8

82.8

32.4

Minor 5ss

41.7

-0.9

2.8

57.4

46.9

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583