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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43785207_43785930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43785207 - 43785930

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CATGGGTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATAACTCAATT

Flanking Amino Acid:

AIGQRPLLMEEINTILQYVV

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

89.9

22.1

Major BPS

100

1.24

0.5

100

Major PPT

62.5

0.28

1.1

57.5

47.1

Minor 5ss

-1

2.8

51.7

39.1

Minor BPS

56.8

0.29

1.8

75.85

40.3

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583