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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43791879_43792070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43791879 - 43792070

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CCTTTGTTATCT

Flanking Amino Acid:

KALYTYESKMAFLTRVAKSQ

Intron Amino Acid Position:

1560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.8

0.6

0.9

40.6

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

48.9

-0

2.3

70.48

46.9

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583