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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43792865_43793066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43792865 - 43793066

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTGGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

ACAATCATACTT

Flanking Amino Acid:

MAQHLQAAGQVLQFLIAHSD

Intron Amino Acid Position:

1647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

25.9

Major BPS

68.1

0.45

58.1

38.5

Major PPT

73.7

0.53

67.8

42.5

Minor 5ss

41.5

-0.9

2.7

53.7

43.5

Minor BPS

43.9

-0.3

1.8

56.24

40.3

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583