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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43795761_43796301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43795761 - 43796301

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

GTAACTTGCATG

Flanking Amino Acid:

RDEIELAMQQICANVMEYCE

Intron Amino Acid Position:

1758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

100

1.12

0.4

100

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

43.1

-0.6

1.9

46.53

40.4

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583