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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43797312_43797909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43797312 - 43797909

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAGTT

5'SS Class:

major

3'SS Sequence:

CTTCTTGTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTCTTGTTACAG

Flanking Amino Acid:

EQLPPDEIKELCQSVMPAGV

Intron Amino Acid Position:

1856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.1

78.9

35.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

84.7

0.78

0.8

79.2

32.9

Minor 5ss

41.9

-0.9

3.5

64.8

46.5

Minor BPS

44.7

-0.5

2.3

55.39

46.1

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583