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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43798034_43798800_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

43798034 - 43798800

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TGTGTGTATACAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AACTCCTTCACT

Flanking Amino Acid:

NRAKLLSLCSYIIETCLFIL

Intron Amino Acid Position:

1897

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

81.6

0.78

0.8

24.9

Major PPT

72.1

0.5

1.1

65.3

44.8

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

67.7

0.64

1.8

79.53

42.4

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583