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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43799590_43800573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43799590 - 43800573

Intron Length:

984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TCTTGCTAAAAT

Flanking Amino Acid:

NRVSQHDIDQFSYCLHTC*

Intron Amino Acid Position:

1965

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

93.6

0.98

0.6

92.5

25.6

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

53.2

0.18

2.2

76.73

45.7

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894