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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43812949_43813301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43812949 - 43813301

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGATG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TGTCACAAAACG

Flanking Amino Acid:

LFLTAELDSKMKELVFAFCH

Intron Amino Acid Position:

2545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

75.3

40.4

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

81.4

0.71

0.8

73.7

36.9

Minor 5ss

35.9

-1.6

3.2

48.4

47.4

Minor BPS

44.9

-0.5

2.1

56.1

44.3

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400