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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43813502_43814604_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43813502 - 43814604

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CTGTGCTGAAAG

Flanking Amino Acid:

KHGDLVSSIWGHVQSHLWHP

Intron Amino Acid Position:

2478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

85.3

32.2

Major BPS

0.42

1.1

57.3

41.7

Major PPT

0.59

0.7

69.5

31.3

Minor 5ss

39.9

-1.1

2.8

46.6

41.8

Minor BPS

46.8

-0.3

2.1

53.26

47.1

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400