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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43819320_43820094_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43819320 - 43820094

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTCAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

TTTGTTTTCAAG

Flanking Amino Acid:

SEPVRVQCRQIYLKYVLDYP

Intron Amino Acid Position:

2279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.1

38.4

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

80.3

0.68

79.2

38.4

Minor 5ss

28.3

-2.5

2.8

33.2

41.9

Minor BPS

47.4

-0.3

59.29

43.1

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400