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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43827504_43827988_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43827504 - 43827988

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTGTCTTAAAA

Flanking Amino Acid:

PKLHRLIVAKVKRDEEHKVV

Intron Amino Acid Position:

1812

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.1

0.18

1.2

60.6

38.6

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

65.4

0.48

1.5

71.75

40.6

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400