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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43829842_43830296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43829842 - 43830296

Intron Length:

455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTGGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CTAACAGCAACT

Flanking Amino Acid:

TAIFSEKMLKHENMVTASVE

Intron Amino Acid Position:

1637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

78.8

38.3

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

70.8

0.47

1.1

68.6

42.1

Minor 5ss

48.4

-0.1

3.2

72.7

44.5

Minor BPS

42.5

-0.4

2.3

63.31

46.1

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400