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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43838932_43840075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43838932 - 43840075

Intron Length:

1144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTGT

5'SS Class:

major

3'SS Sequence:

TTATCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGATTTTTATCT

Flanking Amino Acid:

AVFHAVVWPQVCRLASESQY

Intron Amino Acid Position:

1196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.2

70.4

42.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.3

0.7

0.8

74.2

36.3

Minor 5ss

-0.7

3.3

46.2

Minor BPS

62.8

0.48

1.6

76.96

39.7

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400