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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43840220_43843299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43840220 - 43843299

Intron Length:

3080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

TTTGTTTTCACA

Flanking Amino Acid:

ISCILQQREKVQPRLINPLK

Intron Amino Acid Position:

1148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.4

33.4

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

87.8

0.85

0.7

83.5

31.6

Minor 5ss

44.5

-0.6

3.2

63.6

48.1

Minor BPS

58.6

0.26

1.8

73.92

38.7

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400