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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43863671_43864359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43863671 - 43864359

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTCCCCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ACTTACTAAACC

Flanking Amino Acid:

TMFTMKQFERHFLPCFLKYI

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

84.2

0.77

0.6

82.6

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

58.9

0.26

1.9

69.63

41.7

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400