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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43865756_43866265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43865756 - 43866265

Intron Length:

510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AATGCATGAATA

Flanking Amino Acid:

KVSLPENVCQVLIKMLQTSN

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

74.1

38.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

32.1

-2

3.1

40.2

45.9

Minor BPS

49.2

-0

1.8

61.39

38.3

Associated Gene:

Gene:

UTP20

Ensembl Gene ID:

ENSAPLG00000015651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016392

43809377 - 43873776

64400