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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43894293_43895130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43894293 - 43895130

Intron Length:

838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTGG

5'SS Class:

major

3'SS Sequence:

GTTCCTCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TGTTCCTCATGC

Flanking Amino Acid:

GVVCTFYCTLGGLKAVVWTD

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

64.1

42.6

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

75.9

0.58

0.9

70.1

35.4

Minor 5ss

45.8

-0.4

2.5

44.5

Minor BPS

49.9

-0

2.1

67.5

43.8

Associated Gene:

Gene:

SLC5A8

Ensembl Gene ID:

ENSAPLG00000015303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017549

43887795 - 43911266

23472

ENSAPLT00000017401

43887795 - 43911266

23472

ENSAPLT00000015995

43887795 - 43911266

23472