Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_43930473_43933807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43930473 - 43933807

Intron Length:

3335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTGAAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTCTTTAATT

Flanking Amino Acid:

TWNNFMELGYPLIQNWWTRR

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

74.5

37.6

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

63.7

0.31

57.2

42.3

Minor 5ss

36.9

-1.5

2.7

46.9

41.8

Minor BPS

90.6

1.35

0.7

99.65

21.1

Associated Gene:

Gene:

ANO4

Ensembl Gene ID:

ENSAPLG00000014449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047758

43927389 - 44038489

111101

ENSAPLT00000015114

43927389 - 44038489

111101