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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44172977_44174004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44172977 - 44174004

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TGATTTTTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TGATTTTTAACA

Flanking Amino Acid:

QIPQEVSKKLLHEEFSAEGN

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

76.2

32.6

Major BPS

81.9

0.79

0.8

81.9

Major PPT

77.3

0.61

73.5

40.5

Minor 5ss

37.9

-1.4

2.7

45.5

37.1

Minor BPS

74.6

0.77

1.1

76.5

34.2

Associated Gene:

Gene:

NR1H4

Ensembl Gene ID:

ENSAPLG00000013289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013865

44161075 - 44184054

22980