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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44238462_44244134_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

44238462 - 44244134

Intron Length:

5673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTACTGATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

AGTGCAGGAAAT

Flanking Amino Acid:

TISDSLGNLRRPFASSATAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

46.8

-0.1

1.7

55.1

44.3

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

39.6

-0.7

2.3

58.88

43.4

Associated Gene:

Gene:

SLC17A8

Ensembl Gene ID:

ENSAPLG00000012919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013471

44214803 - 44244235

29433