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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44269030_44271521_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44269030 - 44271521

Intron Length:

2492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

GGCTTCTGAACT

Flanking Amino Acid:

PVFKQQEPIQILLIFLQKMD

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

83.7

0.76

0.6

80.4

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

63.8

0.51

1.5

74.21

42.2

Associated Gene:

Gene:

SCYL2

Ensembl Gene ID:

ENSAPLG00000012666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032411

44260941 - 44291686

30746

ENSAPLT00000013235

44260941 - 44282480

21540