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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44269174_44271521_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44269174 - 44271521

Intron Length:

2348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCCATGCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTGTTTTCCATG

Flanking Amino Acid:

PVFKQQEPIQASNMILLIFL

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

73.6

0.53

0.9

69.3

36.8

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

45.6

-0.4

1.9

54.17

42.2

Associated Gene:

Gene:

SCYL2

Ensembl Gene ID:

ENSAPLG00000012666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026014

44260941 - 44291686

30746