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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44275865_44276511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44275865 - 44276511

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAATCCCTAATA

Flanking Amino Acid:

IQSTNPSEQEPKFPCKEWDP

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

31.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.74

0.7

78.2

29.8

Minor 5ss

32.2

-2

3.5

47.2

48.2

Minor BPS

62.3

0.38

1.6

69.17

36.5

Associated Gene:

Gene:

SCYL2

Ensembl Gene ID:

ENSAPLG00000012666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032411

44260941 - 44291686

30746

ENSAPLT00000026014

44260941 - 44291686

30746

ENSAPLT00000013235

44260941 - 44282480

21540