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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44279787_44286311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44279787 - 44286311

Intron Length:

6525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGTTGCTTATTT

Flanking Amino Acid:

FNGTKKSTKQEVAVFVFDKK

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.8

38.1

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

77.7

0.62

0.9

40.5

Minor 5ss

35.1

-1.7

3.2

49.2

47.1

Minor BPS

59.8

0.39

80.47

41.8

Associated Gene:

Gene:

SCYL2

Ensembl Gene ID:

ENSAPLG00000012666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032411

44260941 - 44291686

30746

ENSAPLT00000026014

44260941 - 44291686

30746