Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_44333693_44335954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44333693 - 44335954

Intron Length:

2262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATGAAGG

Flanking Amino Acid:

TRIQEGQRGEVLTFKEINWQ

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

73.6

0.53

73.8

34.7

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

50.2

-0.1

2.1

64.25

43.1

Associated Gene:

Gene:

UHRF1BP1L

Ensembl Gene ID:

ENSAPLG00000011479

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012025

44310658 - 44364707

54050