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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44339751_44345046_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
44339751 - 44345046

Intron Length:
5296

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGAAAA

5'SS Class:
strong_major

3'SS Sequence:
CTGATATTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAATAT

U12 Branch Point Sequence:
CATTCCTGATAT

Flanking Amino Acid:
TVDYYPFHKAGDNCNHWMHY

Intron Amino Acid Position:
369

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.8
0.82
0.9
78.7
29.9

Major BPS
67.5
0.44
1.1
63.7
42.3

Major PPT
76.2
0.59
1
69.6
40.5

Minor 5ss
38.9
-1.3
2.8
48.3
47.4

Minor BPS
52.4
0.15
1.9
71.67
44.5

Associated Gene:

Gene:
UHRF1BP1L

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

44310658 - 44364707
54050