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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44770280_44775644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44770280 - 44775644

Intron Length:

5365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CCTCTCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTATGCTGTATT

Flanking Amino Acid:

QKPPRSITLREPSGNHTPPQ

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

65.8

40.2

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.63

0.9

32.5

Minor 5ss

29.6

-2.3

2.7

28.8

35.5

Minor BPS

48.4

-0

2.2

73.5

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017553

44621167 - 44821092

199926

ENSAPLT00000011596

44621167 - 44821092

199926