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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44797969_44808185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44797969 - 44808185

Intron Length:

10217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

GTAACTCCAACT

Flanking Amino Acid:

STQDACAKMRKSTEQMKKVP

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

74.9

38.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

87.1

0.83

0.8

85.1

34.9

Minor 5ss

39.1

-1.2

2.8

40.9

45.3

Minor BPS

-0

1.9

67.97

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011596

44621167 - 44821092

199926

ENSAPLT00000017553

44621167 - 44821092

199926