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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44843933_44846378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44843933 - 44846378

Intron Length:

2446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

ATTTTATTAATT

Flanking Amino Acid:

LAIYNQKHIQLINGNTDNII

Intron Amino Acid Position:

944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

81.6

33.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

82.1

0.72

0.8

76.2

32.4

Minor 5ss

55.3

0.18

2.7

73.8

36.4

Minor BPS

72.4

0.78

1.5

87.23

31.6

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010879

44835945 - 44867096

31152

ENSAPLT00000045062

44835945 - 44867096

31152

ENSAPLT00000040670

44835945 - 44867096

31152