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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44846499_44847302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44846499 - 44847302

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGATCA

5'SS Class:

major

3'SS Sequence:

TGTTCTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGTTCTTCAACA

Flanking Amino Acid:

LTSSDDQTIRIWETNKVCKS

Intron Amino Acid Position:

904

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.1

35.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

0.63

0.9

73.9

35.5

Minor 5ss

39.5

-1.2

45.4

43.3

Minor BPS

72.7

0.71

1.5

80.58

34.9

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045062

44835945 - 44867096

31152

ENSAPLT00000040670

44835945 - 44867096

31152

ENSAPLT00000010879

44835945 - 44867096

31152