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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44848759_44850352_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44848759 - 44850352

Intron Length:

1594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGGC

5'SS Class:

major

3'SS Sequence:

TATTTTTTTGAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTTCTATATAT

Flanking Amino Acid:

ASCSTDGTVKLWEARSANEL

Intron Amino Acid Position:

766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

64.1

40.9

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

81.1

0.7

83.2

31.8

Minor 5ss

31.3

-2.1

3.4

43.8

Minor BPS

56.1

0.27

82.22

38.9

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040670

44835945 - 44867096

31152

ENSAPLT00000010879

44835945 - 44867096

31152

ENSAPLT00000045062

44835945 - 44867096

31152