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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44850479_44853558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44850479 - 44853558

Intron Length:

3080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATTTCTTATGC

Flanking Amino Acid:

ATCSADKKVKLWDLKGKYCR

Intron Amino Acid Position:

626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

82.6

0.73

0.9

78.1

34.7

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

58.3

0.24

1.9

70.87

40.6

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045062

44835945 - 44867096

31152