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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44853685_44855758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44853685 - 44855758

Intron Length:

2074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATGC

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATTTCTTTATTG

Flanking Amino Acid:

ASCGADKTLQVFKTESGEML

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

36.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

83.9

0.76

0.8

81.4

36.2

Minor 5ss

37.6

-1.4

3.2

50.9

45.7

Minor BPS

64.9

0.33

1.6

69.31

38.8

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010879

44835945 - 44867096

31152

ENSAPLT00000045062

44835945 - 44867096

31152

ENSAPLT00000040670

44835945 - 44867096

31152