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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44857816_44858113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44857816 - 44858113

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGTACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TGTTACCAAATA

Flanking Amino Acid:

VEYSSVLDQKDSIVRENFQE

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

75.9

0.64

66.1

40.5

Major PPT

62.8

0.29

0.9

57.1

37.8

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

47.7

-0.1

2.1

65.96

40.3

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045062

44835945 - 44867096

31152

ENSAPLT00000040670

44835945 - 44867096

31152

ENSAPLT00000010879

44835945 - 44867096

31152