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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44858228_44859755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44858228 - 44859755

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTATTTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TGAACTTTAATT

Flanking Amino Acid:

YHMAGANMQKELRELMFSLD

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

78.9

0.65

0.8

74.1

36.4

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

70.2

0.71

1.2

78.45

37.7

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045062

44835945 - 44867096

31152

ENSAPLT00000040670

44835945 - 44867096

31152

ENSAPLT00000010879

44835945 - 44867096

31152