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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44861753_44862196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44861753 - 44862196

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTAAATTTATTT

Flanking Amino Acid:

QANCIIRECKGSPLVISLIG

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

73.8

30.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

90.7

0.92

0.6

89.3

19.6

Minor 5ss

44.3

-0.6

2.8

58.5

46.3

Minor BPS

49.9

0.07

1.8

70.47

40.6

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045062

44835945 - 44867096

31152

ENSAPLT00000040670

44835945 - 44867096

31152

ENSAPLT00000010879

44835945 - 44867096

31152