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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44862329_44862845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44862329 - 44862845

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATTT

Flanking Amino Acid:

RDRSVTDAVSGNKYEIHVES

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

74.8

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.58

0.9

69.4

41.7

Minor 5ss

32.7

-2

3.1

39.8

40.4

Minor BPS

64.2

0.52

1.5

78.46

Associated Gene:

Gene:

APAF1

Ensembl Gene ID:

ENSAPLG00000010387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045062

44835945 - 44867096

31152

ENSAPLT00000040670

44835945 - 44867096

31152

ENSAPLT00000010879

44835945 - 44867096

31152