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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44884946_44885046_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
44884946 - 44885046

Intron Length:
101

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAATCCT

5'SS Class:
strong_major

3'SS Sequence:
TTGTGTTCTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
ATGGCTTTTATT

Flanking Amino Acid:
SQVLMRLGFKGVWKGLFARI

Intron Amino Acid Position:
306

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.9
0.85
0.9
77.8
36.9

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
82.5
0.73
0.9
76.6
37.7

Minor 5ss
36.2
-1.6
3.1
51.2
45.2

Minor BPS
53.1
0.18
1.7
69.26
42.8

Associated Gene:

Gene:
SLC25A3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

44884785 - 44893551
8767

44884785 - 44893551
8767