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Intron Name: Anas_platyrhynchos_platyrhynchos_1_44889820_44893397_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
44889820 - 44893397

Intron Length:
3578

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGAGCG

5'SS Class:
strong_major

3'SS Sequence:
TCTAATTAAATAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TTTTTTCTAATT

Flanking Amino Acid:
RSLAAASAAEEYSCAYGSGR

Intron Amino Acid Position:
50

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.8
0.82
0.9
68.6
36.5

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
63
0.29
1
59.1
40.6

Minor 5ss
25.3
-2.8
3.1
30.1
43.1

Minor BPS
69.2
0.68
1.6
87.82
31.2

Associated Gene:

Gene:
SLC25A3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

44884785 - 44893551
8767