Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_44899511_44900765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44899511 - 44900765

Intron Length:

1255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTGTTG

5'SS Class:

major

3'SS Sequence:

CTTTAATTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTCTTTAATT

Flanking Amino Acid:

PYEVSTPTGISASCRRPIKG

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

41.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.3

0.57

70.1

Minor 5ss

46.5

-0.4

3.1

64.1

47.4

Minor BPS

83.8

1.14

91.31

32.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010502

44899219 - 44920092

20874