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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45301996_45311181_R

Intron Information:

Intron Rank:

131115

Intron Class:

major

Intron Phase:

Intron Coordinates:

45301996 - 45311181

Intron Length:

9186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTTTTATACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.5

41.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.2

0.79

0.7

84.4

23.5

Minor 5ss

-1.2

2.8

55.8

41.5

Minor BPS

47.7

-0

1.8

65.91

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040806

45301788 - 45311252

9465