Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_45344405_45344784_R

Intron Information:

Intron Rank:

151246

Intron Class:

major

Intron Phase:

Intron Coordinates:

45344405 - 45344784

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACAATTA

5'SS Class:

major

3'SS Sequence:

CTTTTGTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

CTTTTGTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.1

36.7

Major BPS

65.3

0.38

71.6

30.1

Major PPT

0.65

75.6

38.3

Minor 5ss

39.9

-1.1

3.4

52.8

46.2

Minor BPS

58.5

0.26

2.1

73.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036426

45342527 - 45350744

8218