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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45500988_45503077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45500988 - 45503077

Intron Length:

2090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

CCTTTTGCAATT

Flanking Amino Acid:

NMIQETMDDFREACHRDIVN

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

81.6

31.3

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

78.5

0.64

0.8

70.3

35.7

Minor 5ss

45.5

-0.5

2.5

60.1

44.4

Minor BPS

45.2

-0.2

2.1

62.38

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016970

45499949 - 45522350

22402