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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45616681_45618289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45616681 - 45618289

Intron Length:

1609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAACAG

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

TCTACAATTATG

Flanking Amino Acid:

VFSCVSTSKQNMQPDKEILF

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

57.6

41.3

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

89.9

0.9

0.6

84.5

30.4

Minor 5ss

36.7

-1.5

3.1

46.9

48.4

Minor BPS

-0.7

2.1

50.41

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002319

45616510 - 45640896

24387