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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45621397_45623241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45621397 - 45623241

Intron Length:

1845

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTACTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

TTTTTCCTACTC

Flanking Amino Acid:

LRVSLKEAQNLSWPRTTTER

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

84.1

30.2

Major BPS

64.7

0.37

31.5

Major PPT

82.3

0.73

0.8

81.6

29.1

Minor 5ss

45.2

-0.5

2.8

57.4

40.7

Minor BPS

56.6

0.19

1.9

74.28

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002319

45616510 - 45640896

24387