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Intron Name: Anas_platyrhynchos_platyrhynchos_1_4568877_4571764_F

Intron Information:

Intron Rank:

134936

Intron Class:

major

Intron Phase:

Intron Coordinates:

4568877 - 4571764

Intron Length:

2888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031920

4568462 - 4571883

3422