Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_45747755_45749296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45747755 - 45749296

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGGACT

5'SS Class:

major

3'SS Sequence:

CCTTTTTATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGACCCTTTATT

Flanking Amino Acid:

EKGELKLADFGLARAKSVPT

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

41.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.9

0.49

1.1

71.4

37.8

Minor 5ss

-1.8

3.4

46.3

Minor BPS

61.8

0.45

1.6

75.45

40.7

Associated Gene:

Gene:

CDK17

Ensembl Gene ID:

ENSAPLG00000002462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030830

45697863 - 45752879

55017

ENSAPLT00000002502

45697863 - 45753954

56092