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Intron Name: Anas_platyrhynchos_platyrhynchos_1_45842451_45843713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

45842451 - 45843713

Intron Length:

1263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATGTTCTTATTT

Flanking Amino Acid:

SRKIYRFRQNVPIPCYLIAL

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

100

1.24

0.5

100

Major PPT

78.8

0.65

0.9

78.2

35.4

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

64.5

0.53

1.6

77.51

39.6

Associated Gene:

Gene:

LTA4H

Ensembl Gene ID:

ENSAPLG00000002921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003042

45837837 - 45852679

14843